Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCCAGCTGTG
..(((((((.(((((..((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172107
GeneSymbolKCNQ2
Binding site3932,3949
Score0.846
Seed1
Au0.338
Energy-22.3
Binding len17
Me-6.433
Phylopstem-0.3991101428571429
Phylopflank-0.9540916099999999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure