Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACCAGCTGGAGCTGCT
..((((((.((((((...(((&)))....)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172108
GeneSymbolKCNQ2
Binding site1352,1373
Score0.846
Seed1
Au0.441
Energy-22.0
Binding len21
Me-6.246
Phylopstem-0.7147921666666667
Phylopflank-0.6881345512499999
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure