Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGGCTCGCGTGCTTCTGAGCTGCT
..(((((((((((((.(((((&))))))))).))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349160
GeneSymbolB3GALNT1
Binding site497,526
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len29
Me-5.19
Phylopstem0.282799552173913
Phylopflank0.04208572124999998
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position5UTR
2D Structure