Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAAAGGGACCTGCCTGCTCCTCCGTGCAGCTGCAAA
((((((((((((..(..((((&.))))...)..))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172159
GeneSymbolKCNAB1
Binding site191,230
Score0.923
Seed1
Au0.368
Energy-23.8
Binding len26
Me-6.317
Phylopstem0.09801582142857143
Phylopflank0.45740049999999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure