Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTCCATGGTAGAGGCCAGTGA
((((((((((.....((((((.&)))))).....))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172165
GeneSymbolMSH5
Binding site1424,1450
Score0.846
Seed1
Au0.515
Energy-23.6
Binding len26
Me-12.991
Phylopstem2.514923571428571
Phylopflank1.7257792374999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure