Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCGCAAGGAGCTGGA
..((((((((((..(((((((.&))))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172165
GeneSymbolMSH5
Binding site1329,1348
Score0.923
Seed1
Au0.471
Energy-23.8
Binding len19
Me-7.103
Phylopstem0.38398638
Phylopflank1.8504414074999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure