Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTTCGAGCACTTGGAGGGCTGCTGAAGTTCCTGGGTCG
.(((((.((((((((((....&.))))))))))..........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_172166
GeneSymbolMSH5
Binding site608,646
Score1.0
Seed0
Au0.471
Energy-26.4
Binding len27
Me-5.337
Phylopstem2.4751308
Phylopflank2.573789094875
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end4
PositionCDS
2D Structure