Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCCCTGCAGCTAGGAGG
((.(((((((((..(((((((&)))))))..)))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172171
GeneSymbolCAMK2G
Binding site2565,2588
Score0.923
Seed0
Au0.426
Energy-22.2
Binding len23
Me-7.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure