Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGAAATCAAAAGATTGGATGCCCCTGG
((..(((((((((((((((...&)))))))))............))).)))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172175
GeneSymbolIL15
Binding site2047,2080
Score0.846
Seed0
Au0.588
Energy-19.3
Binding len33
Me-8.527
Phylopstem5.575237892857143
Phylopflank4.326021347500001
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure