Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGAAACACCATGGCTGTAGCTGCAGT
((((((((((((((((..(((&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172177
GeneSymbolMRPL42
Binding site125,155
Score0.846
Seed1
Au0.603
Energy-24.9
Binding len21
Me-3.938
Phylopstem-0.38067009375
Phylopflank0.07515622295250002
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure