Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAACTTCTGGGCTCAAGCAATCCTCTCACCTCAGCCTGCAGCTGGAGC
((.((((((((((((..((((&.))))))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172177
GeneSymbolMRPL42
Binding site12621,12674
Score1.0
Seed0
Au0.412
Energy-24.3
Binding len22
Me-5.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure