Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGGGGACATGTGTGTCAGA
..(((((((((.((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_172197
GeneSymbolAGER
Binding site407,429
Score0.846
Seed1
Au0.441
Energy-16.6
Binding len15
Me-8.304
Phylopstem4.958528155555555
Phylopflank5.1827744925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure