Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGAGGACCAGCCAAGCAGCTGCT
..(((((((((((((......&.)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172206
GeneSymbolCAMKK1
Binding site637,666
Score0.923
Seed1
Au0.324
Energy-22.4
Binding len17
Me-5.19
Phylopstem0.04291328133333334
Phylopflank-0.25542063349999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure