Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGAGGACCAGCCAAGCAGCTGCT
..(((((((((((((......&.)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172207
GeneSymbolCAMKK1
Binding site701,730
Score0.923
Seed1
Au0.324
Energy-22.4
Binding len17
Me-5.19
Phylopstem0.5357937533333333
Phylopflank0.03849612125000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure