Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTTGCAGCCGCCCCCAGTCACCACTGAGCAGCAT
.(((.((((((((((((((((&)).)))))))))))...............))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172209
GeneSymbolTAPBP
Binding site867,904
Score0.846
Seed0
Au0.368
Energy-22.7
Binding len37
Me-7.912
Phylopstem1.04367085
Phylopflank1.4501581875
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure