Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGACCCAGCTGCC
..(((((((.((((....(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172212
GeneSymbolCSF1
Binding site155,172
Score0.846
Seed1
Au0.132
Energy-21.6
Binding len17
Me-7.168
Phylopstem0.07610269999999998
Phylopflank0.65834165375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure