Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAGCTGTCAGACCTGCAC
.(((((((((((((((..(((&))).))))))).)))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349190
GeneSymbolRBM6
Binding site1706,1729
Score0.846
Seed1
Au0.515
Energy-20.0
Binding len23
Me-3.793
Phylopstem5.118026566666668
Phylopflank4.386992846250001
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure