Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAGAACCTTGATCCGCCATTTAGCATTGATGGGAAGATGGTAGCTGTAAA
(((((((((((((((((((((&))))))))).........)))).........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349190
GeneSymbolRBM6
Binding site940,996
Score0.872
Seed1
Au0.559
Energy-19.3
Binding len56
Me-3.938
Phylopstem3.728933512727271
Phylopflank3.27216201125
Longest consecutive pairings9
Position of longest consecutive pairings47
Pairings in 3prime end8
PositionCDS
2D Structure