Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCGCACAGCCGCGCTGGAAA
((.((((.((((((((..((.&))..)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172217
GeneSymbolIL16
Binding site381,401
Score1.0
Seed0
Au0.5
Energy-21.8
Binding len20
Me-7.809
Phylopstem2.860105875
Phylopflank2.1104139455
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure