Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTGAGCCCCTTGTTGACACTTGGGGCTGCGGA
((((((((.((((((((((((&)))))))..))))..............).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172226
GeneSymbolCAMKK2
Binding site4351,4389
Score0.846
Seed1
Au0.412
Energy-20.9
Binding len38
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure