Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGGCCCGGCTGCAGA
(((((((((.((((...((((&))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172230
GeneSymbolSYVN1
Binding site1576,1597
Score0.846
Seed1
Au0.338
Energy-24.9
Binding len21
Me-6.149
Phylopstem0.12768260555555555
Phylopflank-0.25151488812499995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure