Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAGGGGCAGCCGCAGTCGCGC
.(((.(((((((((((..(((&)))......))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172230
GeneSymbolSYVN1
Binding site7,32
Score0.923
Seed0
Au0.295
Energy-24.5
Binding len25
Me-7.912
Phylopstem2.8132699090909092
Phylopflank1.7404604099999998
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure