Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTGAGCCAGGC
.((((((...(((((((((...&))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_172241
GeneSymbolCTAGE1
Binding site3959,3976
Score0.846
Seed1
Au0.618
Energy-18.7
Binding len17
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure