Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGATACAGCGGCTGTT
..((((((((.(((.(((((.&))))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172245
GeneSymbolCSF2RA
Binding site1202,1223
Score0.846
Seed1
Au0.529
Energy-21.5
Binding len21
Me-8.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure