Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTGCAACACGACGCACTGCC
..((((.(((((((((((.((&)).)))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172245
GeneSymbolCSF2RA
Binding site833,856
Score0.846
Seed0
Au0.426
Energy-19.7
Binding len23
Me-6.501
Phylopstem-0.44550853333333335
Phylopflank2.11625175625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure