Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTGCAACACGACGCACTGCC
..((((.(((((((((((.((&)).)))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172246
GeneSymbolCSF2RA
Binding site857,880
Score0.808
Seed0
Au0.426
Energy-19.7
Binding len23
Me-6.501
Phylopstem0.0913461066666667
Phylopflank-0.3792073575000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure