Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGAGTACTGGCGGCGGCTGCGGA
((((((((((.((((((....&.))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172251
GeneSymbolMRPL54
Binding site359,386
Score0.846
Seed1
Au0.324
Energy-21.8
Binding len20
Me-6.762
Phylopstem3.4779855600000005
Phylopflank3.7756107175
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure