Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGTCGGCCCTGGCAGCTGCAAC
(((((((((((((((...((.&))....)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172312
GeneSymbolSPAG8
Binding site233,258
Score0.846
Seed1
Au0.353
Energy-23.8
Binding len25
Me-4.171
Phylopstem0.369156415
Phylopflank-0.05363478287499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure