Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGTGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172347
GeneSymbolKCNG4
Binding site4527,4553
Score0.846
Seed1
Au0.426
Energy-20.8
Binding len26
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure