Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGATGGACAATTGGCTAAAT&TTGGCTAGTAAAAGCCATCTA
..((((((...(((((((((..&))))))))).....)))))).
Details
MiRNAhsa-miR-4662b
RefseqIDNM_172352
GeneSymbolCD46
Binding site2340,2361
Score0.808
Seed1
Au0.632
Energy-16.8
Binding len21
Me-10.081
Phylopstem-0.060385222222222236
Phylopflank-0.322482759
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure