Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACTGTGGCTTAGCT
..(((((((((((((((....&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172359
GeneSymbolCD46
Binding site1447,1465
Score0.923
Seed1
Au0.588
Energy-19.5
Binding len18
Me-4.957
Phylopstem-0.03954935294117649
Phylopflank-0.17811500524999996
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure