Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACTGTGGCTTAGCT
..(((((((((((((((....&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172361
GeneSymbolCD46
Binding site1315,1333
Score0.846
Seed1
Au0.588
Energy-19.5
Binding len18
Me-4.957
Phylopstem-0.0989259294117647
Phylopflank-0.433248700375
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure