Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGAGAGAGGGGGCCGGG
..(((((((((((((.(((...&))).))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172362
GeneSymbolKCNH1
Binding site2462,2481
Score0.846
Seed1
Au0.368
Energy-24.8
Binding len19
Me-5.19
Phylopstem-0.9198342142857142
Phylopflank-0.12358985125
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure