Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGCTGTGGCTC
....((((((((((.((((((&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172362
GeneSymbolKCNH1
Binding site4403,4421
Score0.923
Seed0
Au0.441
Energy-22.4
Binding len18
Me-10.282
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure