Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCGCAGAAGATTCTGTCCAGTGG
(((((((...((((((((((((&)))))).)))))).....).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172365
GeneSymbolPPP1R36
Binding site172,199
Score0.846
Seed1
Au0.529
Energy-20.8
Binding len27
Me-8.55
Phylopstem-0.1761368055384615
Phylopflank-0.10306853055000001
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure