Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTCATTTTACACCTGCAGCA
.....(((((((.((((((((&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172365
GeneSymbolPPP1R36
Binding site212,235
Score0.846
Seed0
Au0.559
Energy-19.5
Binding len18
Me-14.955
Phylopstem0.19439443750000002
Phylopflank-0.13592463055
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure