Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAACCAAGCTTCCAAG
(((.((((..(((((((((((&))))))))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172366
GeneSymbolFBXO16
Binding site319,341
Score1.0
Seed0
Au0.574
Energy-19.2
Binding len22
Me-9.268
Phylopstem0.4064951636363638
Phylopflank1.4103552449999999
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure