Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAGCCGACAGTCACATGATAAGAAAAATAAATTGCAGG
(((((((((((((((.(((..&))))))))).)))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172366
GeneSymbolFBXO16
Binding site830,871
Score0.923
Seed1
Au0.618
Energy-17.8
Binding len41
Me-4.171
Phylopstem1.7488848162162158
Phylopflank1.9372298899999998
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure