Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCTGACCGCAGCTC
....(((((((((((..(((.&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172367
GeneSymbolTRARG1
Binding site2260,2277
Score0.846
Seed0
Au0.294
Energy-21.4
Binding len17
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure