Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGGCACCAGGGAAGGATGGGTACGACGGACTGCCGGGGCCCAAGGGGGAGCCAGG
..(((((((((((.(((((...&.))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172369
GeneSymbolC1QC
Binding site215,277
Score0.846
Seed1
Au0.309
Energy-29.2
Binding len19
Me-5.814
Phylopstem-1.0510902636363637
Phylopflank-0.10537430500000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure