Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTATGAGGCCTCTAAGGACCGCAGGCAGCCTCTAGAACGAATGTGGACCTGCAAC
((((((((((((((.(.((((&.))))...).))))))))........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172370
GeneSymbolDAOA
Binding site427,488
Score1.0
Seed1
Au0.485
Energy-22.3
Binding len49
Me-4.673
Phylopstem1.4270504894736842
Phylopflank0.74299291
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure