Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCTCAGCCCTGCGTTGTGTGTTTTCAGATGAGTTACTGTTAACAGGTA
((((((((((((((((((....&.))))))))))))).....................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_172389
GeneSymbolNFATC1
Binding site3752,3803
Score0.974
Seed1
Au0.529
Energy-21.7
Binding len41
Me-3.938
Phylopstem-0.08578951025641028
Phylopflank0.19881088999999996
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end4
Position3UTR
2D Structure