Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATACTACAGCCAGCAGCTCGCGAT
(((((((((((((((((....&.))))))).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172389
GeneSymbolNFATC1
Binding site2234,2261
Score0.846
Seed1
Au0.353
Energy-24.6
Binding len21
Me-3.938
Phylopstem-0.2789457789473685
Phylopflank0.10940058999999998
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure