Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCTCCCGGAGCTGCAAC
((((((((.(((..(..((((&))))...)..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172389
GeneSymbolNFATC1
Binding site580,603
Score0.846
Seed1
Au0.353
Energy-24.0
Binding len23
Me-7.373
Phylopstem1.71626875
Phylopflank0.81518831125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure