Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCGCTTCCCCAACTTCAGCATCCTCTACTGGCTGGGC
.(.(((((((((((((.((((&)))))))))))).........................))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173042
GeneSymbolIL18BP
Binding site1183,1228
Score1.0
Seed0
Au0.426
Energy-22.2
Binding len45
Me-5.351
Phylopstem1.7862880236842102
Phylopflank1.33158478
Longest consecutive pairings12
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure