Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCGCTTCCCCAACTTCAGCATCCTCTACTGGCTGGGC
.(.(((((((((((((.((((&)))))))))))).........................))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173044
GeneSymbolIL18BP
Binding site430,475
Score0.923
Seed0
Au0.426
Energy-22.2
Binding len45
Me-5.351
Phylopstem1.3381670315789473
Phylopflank1.3600362887500002
Longest consecutive pairings12
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure