Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCGTCAATGCCATGGG
.((((((((...((((((((((&))))))))))..)))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173050
GeneSymbolSCUBE1
Binding site499,521
Score0.923
Seed1
Au0.426
Energy-20.4
Binding len22
Me-11.207
Phylopstem0.9312414500000001
Phylopflank1.3304798900000003
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure