Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTGCACCTGATGACCCAGAGGAGGGCCGGC
..(((((((.(((((((((...&.))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349242
GeneSymbolPDE4D
Binding site2239,2273
Score1.0
Seed1
Au0.426
Energy-26.7
Binding len19
Me-6.2
Phylopstem3.2128016666666666
Phylopflank2.7921126637500002
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure