Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGATGGAGCCAGC
..((((((((.((((((((...&)))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173050
GeneSymbolSCUBE1
Binding site4537,4555
Score0.897
Seed1
Au0.294
Energy-27.6
Binding len18
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure