Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTATTCTACCGCGGCTGCC
..(((((((((((.(((((((&))))..)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173050
GeneSymbolSCUBE1
Binding site8537,8561
Score1.0
Seed1
Au0.353
Energy-25.1
Binding len24
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure